User profiles for "author:Spyridon Bakas"

Spyridon Bakas

Associate Professor, Indiana University. - Director, Division of Computational Pathology
Verified email at iu.edu
Cited by 18202

[HTML][HTML] The future of digital health with federated learning

N Rieke, J Hancox, W Li, F Milletari, HR Roth… - NPJ digital …, 2020 - nature.com
Data-driven machine learning (ML) has emerged as a promising approach for building
accurate and robust statistical models from medical data, which is collected in huge volumes …

Advanced magnetic resonance imaging in glioblastoma: a review

G Shukla, GS Alexander, S Bakas… - Chinese clinical …, 2017 - cco.amegroups.org
Glioblastoma, the most common and most rapidly progressing primary malignant tumor of
the central nervous system, continues to portend a dismal prognosis, despite improvements …

Understanding metric-related pitfalls in image analysis validation

A Reinke, MD Tizabi, M Baumgartner, M Eisenmann… - Nature …, 2024 - nature.com
Validation metrics are key for tracking scientific progress and bridging the current chasm
between artificial intelligence research and its translation into practice. However, increasing …

[HTML][HTML] Advancing the cancer genome atlas glioma MRI collections with expert segmentation labels and radiomic features

S Bakas, H Akbari, A Sotiras, M Bilello, M Rozycki… - Scientific data, 2017 - nature.com
Gliomas belong to a group of central nervous system tumors, and consist of various sub-
regions. Gold standard labeling of these sub-regions in radiographic imaging is essential for …

The image biomarker standardization initiative: standardized quantitative radiomics for high-throughput image-based phenotyping

A Zwanenburg, M Vallières, MA Abdalah, HJWL Aerts… - Radiology, 2020 - pubs.rsna.org
Background Radiomic features may quantify characteristics present in medical imaging.
However, the lack of standardized definitions and validated reference values have …

[HTML][HTML] The medical segmentation decathlon

M Antonelli, A Reinke, S Bakas, K Farahani… - Nature …, 2022 - nature.com
International challenges have become the de facto standard for comparative assessment of
image analysis algorithms. Although segmentation is the most widely investigated medical …

Identifying the best machine learning algorithms for brain tumor segmentation, progression assessment, and overall survival prediction in the BRATS challenge

S Bakas, M Reyes, A Jakab, S Bauer… - arXiv preprint arXiv …, 2018 - arxiv.org
Gliomas are the most common primary brain malignancies, with different degrees of
aggressiveness, variable prognosis and various heterogeneous histologic sub-regions, ie …

[HTML][HTML] Federated learning in medicine: facilitating multi-institutional collaborations without sharing patient data

MJ Sheller, B Edwards, GA Reina, J Martin, S Pati… - Scientific reports, 2020 - nature.com
Several studies underscore the potential of deep learning in identifying complex patterns,
leading to diagnostic and prognostic biomarkers. Identifying sufficiently large and diverse …

The rsna-asnr-miccai brats 2021 benchmark on brain tumor segmentation and radiogenomic classification

U Baid, S Ghodasara, S Mohan, M Bilello… - arXiv preprint arXiv …, 2021 - arxiv.org
The BraTS 2021 challenge celebrates its 10th anniversary and is jointly organized by the
Radiological Society of North America (RSNA), the American Society of Neuroradiology …

[HTML][HTML] The liver tumor segmentation benchmark (lits)

P Bilic, P Christ, HB Li, E Vorontsov, A Ben-Cohen… - Medical Image …, 2023 - Elsevier
In this work, we report the set-up and results of the Liver Tumor Segmentation Benchmark
(LiTS), which was organized in conjunction with the IEEE International Symposium on …